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  4. Session 2: Applications of Genomic Nomenclature in Surveillance
  5. ChewBBACA and creation of cgMLST schemes

GenEpi-BioTrain - Virtual training 21 - Bacterial Strain Taxonomy for Genomic Surveillance

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ChewBBACA and creation of cgMLST schemes

    • ChewBBACA and creation of cgMLST schemes (practical).pdfChewBBACA and creation of cgMLST schemes (practical).pdf
    • ChewBBACA and creation of cgMLST schemes (theoretical).pdfChewBBACA and creation of cgMLST schemes (theoretical).pdf
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Skip GenEpi-BioTrain - Virtual training 21 - Bacterial Strain Taxonomy for Genomic Surveillance

GenEpi-BioTrain - Virtual training 21 - Bacterial Strain Taxonomy for Genomic Surveillance

  • Participants

  • Welcome to the virtual training on Bacterial strai...

  • Aim and Objectives

  • Summary of tools and software employed during the ...

  • Delivery

  • Session 1: Foundations of Genomic Nomenclature

  • Session 2: Applications of Genomic Nomenclature in...

    • FileAGENDA

    • FileDatasets for ReporTree exercise

    • FolderChewBBACA and creation of cgMLST schemes

    • FileKmer-based approach: the example of PopPunk

    • FileReporTree: Clustering and Visualization for Survei...

  • Evaluation and Certificates

  • Contacts

 European Centre for Disease Prevention and Control (ECDC) 2025
 courses@ecdc.europa.eu
 https://ecdc.europa.eu
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